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Showing posts with the label Intracellular Protein Turnover

What are the different routes followed by proteins targeted for lysosomal degradation?

Lysosomal degradation is one of the two major  intracellular pathways  responsible for maintaining  protein homeostasis  in eukaryotic cells, the other being the  ubiquitin-proteasome system.  While the  proteasome  primarily degrades  short-lived  or misfolded proteins that are tagged with  ubiquitin,  lysosomal degradation mainly targets  long-lived  cytoplasmic proteins, membrane proteins, protein aggregates, damaged organelles and extracellular proteins taken up by the cell. It plays a key role not only in general protein turnover but also in specialized physiological processes such as antigen presentation, cellular remodeling and metabolic adaptation during stress. Proteins targeted for lysosomal degradation are transported into the lysosome through four distinct routes, each with its own mechanism of substrate selection, delivery, and regulation. These include: Macroautophagy Microautophagy Chaperone-Mediated Au...

Explain the role of ubiquitin in protein turnover

Ubiquitin is a highly conserved protein made up of  76 amino acids.  It functions as a regulatory molecule in cells by  tagging  specific proteins for degradation. This tagging ensures that unnecessary, misfolded, damaged, or short-lived proteins are identified, and removed in a selective and controlled way. This process is essential for maintaining cellular balance and preventing harmful accumulation of proteins. Ubiquitin does not perform the degradation itself, but by attaching to target proteins, it directs them to the proteasome, where they are broken down. This tagging function allows ubiquitin to play multiple crucial roles across different cellular processes. The major roles of ubiquitin in protein turnover can be classified as follows: 1. Protein Tagging for Degradation The most well-established role of ubiquitin is in  targeting proteins for degradation  via the ubiquitin-proteasome system (UPS). In this process, multiple ubiquitin molecules are c...

What are the key properties of the protein turnover pathways?

Protein turnover is a continuous and regulated process in which proteins inside a cell are broken down and replaced by newly synthesized ones. It is not just a recycling mechanism, but also a core regulatory process that helps maintain cellular homeostasis. Through protein turnover, cells can remove misfolded, damaged, or excess proteins and replace them with functional ones. It also allows the cell to adapt to environmental stress, control the cell cycle, regulate signaling pathways, manage growth and apoptosis. Hence, the pathways responsible for protein turnover such as the  ubiquitin-proteasome system  and  lysosomal degradation system,  both are designed with specific properties that ensure precision, efficiency and control. The properties of protein turnover pathways can be systematically classified in two ways: Based on biochemical properties Based on physiological-level properties 1. Biochemical Properties of Protein Turnover Pathways There are three fundamen...

What is intracellular protein turnover?

Intracellular protein turnover is the continuous and regulated process by which proteins inside a cell are  synthesized  (built or formed) and  degraded  (broken down). This process plays a vital role in maintaining the cell's internal balance, known as  proteostasis.  It ensures that old, misfolded, damaged, and excess proteins are efficiently removed and replaced with newly synthesized, functional proteins. This dynamic balance between synthesis and degradation helps the cell adapt to changes, control growth, respond to stress and perform normal physiological functions. Each protein inside the cell has a specific half-life or lifespan. Some proteins are very short-lived and degrade within minutes, while others may last for hours or days. When a protein becomes non-functional, either due to damage or mutation, it must be removed. If this removal does not happen properly, faulty or misfolded proteins may accumulate and cause various diseases, including canc...

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